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RNA sequencing techniques, like bulk RNA-seq and Single Cell (sc) RNA-seq, are critical tools for the biologist looking to analyze the genetic activity/transcriptome of a tissue or cell during an experimental procedure. Platforms like Illumina's next-generation sequencing (NGS) are used to produce the raw data for this experimental procedure. This raw FASTQ data must then be prepared via a complex series of data manipulations by bioinformaticians. This process currently takes place on an unwieldy textual user interface like a terminal/command line that requires the user to install and import multiple program packages, preventing the untrained biologist from initiating data analysis. Open-source platforms like Galaxy have produced a more user-friendly pipeline, yet the visual interface remains cluttered and highly technical, remaining uninviting for the natural scientist. To address this, SeqMate is a user-friendly tool that allows for one-click analytics by utilizing the power of a large language model (LLM) to automate both data preparation and analysis (differential expression, trajectory analysis, etc). Furthermore, by utilizing the power of generative AI, SeqMate is also capable of analyzing such findings and producing written reports of upregulated/downregulated/user-prompted genes with sources cited from known repositories like PubMed, PDB, and Uniprot.

The significance of emotion detection is increasing in education, entertainment, and various other domains. We are developing a system that can identify and transform facial expressions into emojis to provide immediate feedback.The project consists of two components. Initially, we will employ sophisticated image processing techniques and neural networks to construct a deep learning model capable of precisely categorising facial expressions. Next, we will develop a basic application that records live video using the camera on your device. The app will utilise a sophisticated model to promptly analyse facial expressions and promptly exhibit corresponding emojis.Our objective is to develop a dynamic tool that integrates deep learning and real-time video processing for the purposes of online education, virtual events, gaming, and enhancing user experience. This tool enhances interactions and introduces novel emotional intelligence technologies.

People with color vision deficiency often face challenges in distinguishing colors such as red and green, which can complicate daily tasks and require the use of assistive tools or environmental adjustments. Current support tools mainly focus on presentation-based aids, like the color vision modes found in iPhone accessibility settings. However, offering context-aware support, like indicating the doneness of meat, remains a challenge since task-specific solutions are not cost-effective for all possible scenarios. To address this, our paper proposes an application that provides contextual and autonomous assistance. This application is mainly composed of: (i) an augmented reality interface that efficiently captures context; and (ii) a multi-modal large language model-based reasoner that serves to cognitize the context and then reason about the appropriate support contents. Preliminary user experiments with two color vision deficient users across five different scenarios have demonstrated the effectiveness and universality of our application.

Currently, the integration of mobile Graphical User Interfaces (GUIs) is ubiquitous in most people's daily lives. And the ongoing evolution of multimodal large-scale models, such as GPT-4v, Qwen-VL-Max, has significantly bolstered the capabilities of GUI comprehension and user action analysis, showcasing the potentiality of intelligent GUI assistants. However, current GUI Agents often need to access page layout information through calling system APIs, which may pose privacy risks. Fixing GUI (such as mobile interfaces) to a certain low resolution might result in the loss of fine-grained image details. At the same time, the multimodal large models built for GUI Agents currently have poor understanding and decision-making abilities for Chinese GUI interfaces, making them difficult to apply to a large number of Chinese apps. This paper introduces MobileFlow, a multimodal large language model meticulously crafted for mobile GUI agents. Transforming from the open-source model Qwen-VL-Chat into GUI domain, MobileFlow contains approximately 21 billion parameters and is equipped with novel hybrid visual encoders, making it possible for variable resolutions of image inputs and good support for multilingual GUI. By incorporating Mixture of Experts (MoE) expansions and pioneering alignment training strategies, MobileFlow has the capacity to fully interpret image data and comprehend user instructions for GUI interaction tasks. Finally, MobileFlow outperforms Qwen-VL-Max and GPT-4v in terms of task execution by GUI agents on both public and our proposed evaluation metrics, and has been successfully deployed in real-world business contexts, proving its effectiveness for practical applications.

This report presents a novel Mamba-based encoder-decoder architecture, QueryMamba, featuring an integrated verb-noun interaction module that utilizes a statistical verb-noun co-occurrence matrix to enhance video action forecasting. This architecture not only predicts verbs and nouns likely to occur based on historical data but also considers their joint occurrence to improve forecast accuracy. The efficacy of this approach is substantiated by experimental results, with the method achieving second place in the Ego4D LTA challenge and ranking first in noun prediction accuracy.

Depth estimation is a cornerstone for autonomous driving, yet acquiring per-pixel depth ground truth for supervised learning is challenging. Self-Supervised Surround Depth Estimation (SSSDE) from consecutive images offers an economical alternative. While previous SSSDE methods have proposed different mechanisms to fuse information across images, few of them explicitly consider the cross-view constraints, leading to inferior performance, particularly in overlapping regions. This paper proposes an efficient and consistent pose estimation design and two loss functions to enhance cross-view consistency for SSSDE. For pose estimation, we propose to use only front-view images to reduce training memory and sustain pose estimation consistency. The first loss function is the dense depth consistency loss, which penalizes the difference between predicted depths in overlapping regions. The second one is the multi-view reconstruction consistency loss, which aims to maintain consistency between reconstruction from spatial and spatial-temporal contexts. Additionally, we introduce a novel flipping augmentation to improve the performance further. Our techniques enable a simple neural model to achieve state-of-the-art performance on the DDAD and nuScenes datasets. Last but not least, our proposed techniques can be easily applied to other methods. The code will be made public.

Medical report generation from X-ray images is a challenging task, particularly in an unpaired setting where paired image-report data is unavailable for training. To address this challenge, we propose a novel model that leverages the available information in two distinct datasets, one comprising reports and the other consisting of images. The core idea of our model revolves around the notion that combining auto-encoding report generation with multi-modal (report-image) alignment can offer a solution. However, the challenge persists regarding how to achieve this alignment when pair correspondence is absent. Our proposed solution involves the use of auxiliary tasks, particularly contrastive learning and classification, to position related images and reports in close proximity to each other. This approach differs from previous methods that rely on pre-processing steps, such as using external information stored in a knowledge graph. Our model, named MedRAT, surpasses previous state-of-the-art methods, demonstrating the feasibility of generating comprehensive medical reports without the need for paired data or external tools.

Affective computing stands at the forefront of artificial intelligence (AI), seeking to imbue machines with the ability to comprehend and respond to human emotions. Central to this field is emotion recognition, which endeavors to identify and interpret human emotional states from different modalities, such as speech, facial images, text, and physiological signals. In recent years, important progress has been made in generative models, including Autoencoder, Generative Adversarial Network, Diffusion Model, and Large Language Model. These models, with their powerful data generation capabilities, emerge as pivotal tools in advancing emotion recognition. However, up to now, there remains a paucity of systematic efforts that review generative technology for emotion recognition. This survey aims to bridge the gaps in the existing literature by conducting a comprehensive analysis of over 320 research papers until June 2024. Specifically, this survey will firstly introduce the mathematical principles of different generative models and the commonly used datasets. Subsequently, through a taxonomy, it will provide an in-depth analysis of how generative techniques address emotion recognition based on different modalities in several aspects, including data augmentation, feature extraction, semi-supervised learning, cross-domain, etc. Finally, the review will outline future research directions, emphasizing the potential of generative models to advance the field of emotion recognition and enhance the emotional intelligence of AI systems.

Image restoration is a classic low-level problem aimed at recovering high-quality images from low-quality images with various degradations such as blur, noise, rain, haze, etc. However, due to the inherent complexity and non-uniqueness of degradation in real-world images, it is challenging for a model trained for single tasks to handle real-world restoration problems effectively. Moreover, existing methods often suffer from over-smoothing and lack of realism in the restored results. To address these issues, we propose Diff-Restorer, a universal image restoration method based on the diffusion model, aiming to leverage the prior knowledge of Stable Diffusion to remove degradation while generating high perceptual quality restoration results. Specifically, we utilize the pre-trained visual language model to extract visual prompts from degraded images, including semantic and degradation embeddings. The semantic embeddings serve as content prompts to guide the diffusion model for generation. In contrast, the degradation embeddings modulate the Image-guided Control Module to generate spatial priors for controlling the spatial structure of the diffusion process, ensuring faithfulness to the original image. Additionally, we design a Degradation-aware Decoder to perform structural correction and convert the latent code to the pixel domain. We conducted comprehensive qualitative and quantitative analysis on restoration tasks with different degradations, demonstrating the effectiveness and superiority of our approach.

In the rapidly evolving landscape of Natural Language Processing (NLP) and text generation, the emergence of Retrieval Augmented Generation (RAG) presents a promising avenue for improving the quality and reliability of generated text by leveraging information retrieved from user specified database. Benchmarking is essential to evaluate and compare the performance of the different RAG configurations in terms of retriever and generator, providing insights into their effectiveness, scalability, and suitability for the specific domain and applications. In this paper, we present a comprehensive framework to generate a domain relevant RAG benchmark. Our framework is based on automatic question-answer generation with Human (domain experts)-AI Large Language Model (LLM) teaming. As a case study, we demonstrate the framework by introducing WeQA, a first-of-its-kind benchmark on the wind energy domain which comprises of multiple scientific documents/reports related to environmental impact of wind energy projects. Our framework systematically evaluates RAG performance using diverse metrics and multiple question types with varying complexity level. We also demonstrate the performance of different models on our benchmark.

Transferable neural architecture search (TNAS) has been introduced to design efficient neural architectures for multiple tasks, to enhance the practical applicability of NAS in real-world scenarios. In TNAS, architectural knowledge accumulated in previous search processes is reused to warm up the architecture search for new tasks. However, existing TNAS methods still search in an extensive search space, necessitating the evaluation of numerous architectures. To overcome this challenge, this work proposes a novel transfer paradigm, i.e., design principle transfer. In this work, the linguistic description of various structural components' effects on architectural performance is termed design principles. They are learned from established architectures and then can be reused to reduce the search space by discarding unpromising architectures. Searching in the refined search space can boost both the search performance and efficiency for new NAS tasks. To this end, a large language model (LLM)-assisted design principle transfer (LAPT) framework is devised. In LAPT, LLM is applied to automatically reason the design principles from a set of given architectures, and then a principle adaptation method is applied to refine these principles progressively based on the new search results. Experimental results show that LAPT can beat the state-of-the-art TNAS methods on most tasks and achieve comparable performance on others.

Recent developments in the field of Natural Language Processing, especially language models such as the transformer have brought state-of-the-art results in language understanding and language generation. In this work, we investigate the use of the transformer model for radiology report generation from chest X-rays. We also highlight limitations in evaluating radiology report generation using only the standard language generation metrics. We then applied a transformer based radiology report generation architecture, and also compare the performance of a transformer based decoder with the recurrence based decoder. Experiments were performed using the IU-CXR dataset, showing superior results to its LSTM counterpart and being significantly faster. Finally, we identify the need of evaluating radiology report generation system using both language generation metrics and classification metrics, which helps to provide robust measure of generated reports in terms of their coherence and diagnostic value.